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首页> 外文期刊>Journal of Clinical Microbiology >Development and Evaluation of a Simple Assay for Marburg Virus Detection Using a Reverse Transcription-Loop-Mediated Isothermal Amplification Method
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Development and Evaluation of a Simple Assay for Marburg Virus Detection Using a Reverse Transcription-Loop-Mediated Isothermal Amplification Method

机译:使用逆转录循环介导的等温扩增方法开发和评估马尔堡病毒的简单方法

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摘要

Marburg virus (MARV) causes a severe hemorrhagic fever in humans with a high mortality rate. The rapid and accurate identification of the virus is required to appropriately provide infection control and outbreak management. Here, we developed and evaluated a one-step reverse transcription-loop-mediated isothermal amplification (RT-LAMP) assay for the rapid and simple detection of MARV. By combining two sets of primers specific for the Musoke and Ravn genetic lineages, a multiple RT-LAMP assay detected MARV strains of both lineages, and no cross-reactivity with other hemorrhagic fever viruses (Ebola virus and Lassa virus) was observed. The assay could detect 102 copies of the viral RNA per tube within 40 min by real-time monitoring of the turbidities of the reaction mixtures. The assay was further evaluated using viral RNA extracted from clinical specimens collected in the 2005 Marburg hemorrhagic fever outbreak in Angola and yielded positive results for samples containing MARV at greater than 104 50% tissue culture infective doses/ml, exhibiting 78% (14 of 18 samples positive) consistency with the results of a reverse transcription-PCR assay carried out in the field laboratory. The results obtained by both agarose gel electrophoresis and naked-eye judgment indicated that the RT-LAMP assay developed in this study is an effective tool for the molecular detection of MARV. Furthermore, it seems suitable for use for field diagnostics or in laboratories in areas where MARV is endemic.
机译:马尔堡病毒(MARV)在人中引起严重的出血热,死亡率很高。要正确提供感染控制和爆发管理,需要快速准确地识别病毒。在这里,我们开发和评估了一步一步逆转录环介导的等温扩增(RT-LAMP)分析,用于快速简单地检测MARV。通过组合两组对Musoke和Ravn遗传谱系具有特异性的引物,多重RT-LAMP分析检测到了两个谱系的MARV株,并且未观察到与其他出血热病毒(埃博拉病毒和Lassa病毒)的交叉反应。通过实时监测反应混合物的浊度,该检测法可在40分钟内检测出每管10 2 个病毒RNA。使用从2005年安哥拉Marburg出血热暴发中收集的临床标本中提取的病毒RNA进一步评估了该测定方法,对于包含大于10 4 50%组织培养感染剂量/ ml的MARV的样品,获得了阳性结果,与实地实验室进行的逆转录PCR分析结果具有78%的一致性(18个样本中有14个阳性)。通过琼脂糖凝胶电泳和肉眼判断获得的结果表明,本研究开发的RT-LAMP测定法是MARV分子检测的有效工具。此外,它似乎适用于MARV流行地区的现场诊断或实验室。

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