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首页> 外文期刊>Journal of Clinical Microbiology >Rapid Identification and Subtyping of Helicobacter cinaedi Strains by Intact-Cell Mass Spectrometry Profiling with the Use of Matrix-Assisted Laser Desorption Ionization–Time of Flight Mass Spectrometry
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Rapid Identification and Subtyping of Helicobacter cinaedi Strains by Intact-Cell Mass Spectrometry Profiling with the Use of Matrix-Assisted Laser Desorption Ionization–Time of Flight Mass Spectrometry

机译:完整细胞质谱分析与基质辅助激光解吸电离-飞行时间质谱联用技术快速鉴定和鉴定幽门螺杆菌菌株

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摘要

Helicobacter cinaedi infection is recognized as an increasingly important emerging disease in humans. Although H. cinaedi-like strains have been isolated from a variety of animals, it is difficult to identify particular isolates due to their unusual phenotypic profiles and the limited number of biochemical tests for detecting helicobacters. Moreover, analyses of the 16S rRNA gene sequences are also limited due to the high levels of similarity among closely related helicobacters. This study was conducted to evaluate intact-cell mass spectrometry (ICMS) profiling using matrix-assisted laser desorption ionization–time of flight mass spectrometry (MALDI-TOF MS) as a tool for the identification of H. cinaedi. A total of 68 strains of H. cinaedi isolated from humans, dogs, a cat, and hamsters were examined in addition to other Helicobacter species. The major ICMS profiles of H. cinaedi were identical and differed from those of Helicobacter bilis, which show >98% sequence similarity at the 16S rRNA sequence level. A phyloproteomic analysis of the H. cinaedi strains examined in this work revealed that human isolates formed a single cluster that was distinct from that of the animal isolates, with the exception of two strains from dogs. These phyloproteomic results agreed with those of the phylogenetic analysis based on the nucleotide sequences of the hsp60 gene. Because they formed a distinct cluster in both analyses, our data suggest that animal strains may not be a major source of infection in humans. In conclusion, the ICMS profiles obtained using a MALDI-TOF MS approach may be useful for the identification and subtyping of H. cinaedi.
机译:西奈螺旋杆菌感染被认为是人类中越来越重要的新兴疾病。尽管已从多种动物中分离到了H. cinaedi样菌株,但由于其特殊的表型特征和用于检测幽门螺杆菌的生化测试数量有限,因此很难鉴定出特定的分离株。此外,由于紧密相关的螺旋杆菌之间的高度相似性,对16S rRNA基因序列的分析也受到限制。这项研究的目的是使用基质辅助激光解吸电离-飞行时间质谱(MALDI-TOF MS)作为识别中华假丝酵母的工具来评估完整细胞质谱(ICMS)分析。除其他幽门螺杆菌外,还检查了从人,狗,猫和仓鼠中分离出的总共68株H. cinaedi菌株。中华绒螯蟹的主要ICMS配置文件是相同的,与Helicobacter bilis的不同,后者在16S rRNA序列水平上显示> 98%的序列相似性。对这项工作中检查到的H. cinaedi菌株进行的系统进化分析表明,人类分离株形成了与动物分离株截然不同的单个簇,除了狗中的两种菌株。这些系统进化结果与基于 hsp60 基因核苷酸序列的系统发育分析结果相吻合。因为它们在两种分析中都形成了独特的簇,所以我们的数据表明动物株可能不是人类感染的主要来源。总之,使用MALDI-TOF MS方法获得的ICMS谱图可用于识别和鉴定分枝杆菌。

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