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首页> 外文期刊>Journal of Clinical Microbiology >Comparison of Typing Results Obtained for Methicillin-Resistant Staphylococcus aureus Isolates with the DiversiLab System and Pulsed-Field Gel Electrophoresis
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Comparison of Typing Results Obtained for Methicillin-Resistant Staphylococcus aureus Isolates with the DiversiLab System and Pulsed-Field Gel Electrophoresis

机译:用DiversiLab系统和脉冲场凝胶电泳比较耐甲氧西林金黄色葡萄球菌分离株的分型结果

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We compared the results of typing methicillin-resistant Staphylococcus aureus (MRSA) isolates using the DiversiLab system (DL) to the results obtained using pulsed-field gel electrophoresis (PFGE). One hundred five MRSA isolates of PFGE types USA100 to USA1100 and the Brazilian clone, from the Centers for Disease Control and Prevention (CDC) and Project ICARE strain collections, were typed using DL. In addition, four unique sets of MRSA isolates from purported MRSA outbreaks that had been previously typed by DL, each consisting of six isolates (where five isolates were classified as indistinguishable by DL and one was an unrelated DL type) were typed by PFGE. DL separated the 105 MRSA isolates of known USA types into 11 clusters and six unique banding patterns. DL grouped most of the USA100, USA200, and USA1100 isolates into unique clusters. Multilocus sequence type 8 isolates (i.e., USA300 and USA500) often clustered together at >95% similarity in DL dendrograms. Nevertheless, USA300 and USA500 DL patterns could be distinguished using the pattern overlay function of the DL software. Among the hospital outbreak clusters, PFGE and DL identified the same “unrelated” organism in three of four sets. However, PFGE showed more pattern diversity than did DL, suggesting that two of the sets were less likely to represent true outbreaks. In summary, DL is useful for screening MRSA isolates to rule out potential outbreaks of MRSA in hospitals, but PFGE provides better discrimination of potential outbreak strains and is more useful for confirming strain relatedness and specific USA types.
机译:我们比较了使用DiversiLab系统(DL)对耐甲氧西林的金黄色葡萄球菌(MRSA)菌株进行分型的结果与使用脉冲场凝胶电泳(PFGE)获得的结果的比较。使用DL对来自疾病控制和预防中心(CDC)和Project ICARE毒株集合的PFGE USA100至USA1100和巴西克隆的155种MRSA分离株进行了分型。此外,PFGE对先前声称由DL分型的据称MRSA暴发的四组独特的MRSA分离株进行了分类,每组由六个分离株组成(其中五个分离株被DL分类为不可区分的,一个分离株为不相关的DL类型)。 DL将105种已知美国类型的MRSA分离株分为11个簇和6个独特的条带模式。 DL将大多数USA100,USA200和USA1100分离株分组为独特的簇。多位点序列类型8分离株(即USA300和USA500)在DL树状图中通常以> 95%的相似度聚在一起。但是,可以使用DL软件的图案叠加功能来区分USA300和USA500 DL图案。在医院爆发群中,PFGE和DL在四组中的三组中识别出相同的“无关”生物。但是,PFGE表现出比DL更大的模式多样性,这表明其中两个集合代表真实爆发的可能性较小。总而言之,DL可用于筛查MRSA分离株以排除潜在的MRSA爆发,但PFGE可更好地区分潜在的爆发菌株,并更有助于确认菌株的相关性和特定的美国类型。

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