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首页> 外文期刊>Journal of Clinical Microbiology >Identification of a p28 Gene in Ehrlichia ewingii: Evaluation of Gene for Use as a Target for a Species-Specific PCR Diagnostic Assay
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Identification of a p28 Gene in Ehrlichia ewingii: Evaluation of Gene for Use as a Target for a Species-Specific PCR Diagnostic Assay

机译:鉴定在尤文氏毛虫中的p28基因:用作特定物种的PCR诊断分析目标的基因的评估

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PCR was used to amplify a 537-bp region of an Ehrlichia ewingii gene encoding a homologue of the 28-kDa major antigenic protein (P28) of Ehrlichia chaffeensis. The E. ewingii p28 gene homologue was amplified from DNA extracted from whole blood obtained from four humans and one canine with confirmed cases of infection. Sequencing of the PCR products (505 bp) revealed a partial gene with homology to outer membrane protein genes from Ehrlichia and Cowdria spp.:p30 of Ehrlichia canis (≤71.3%),p28 of E. chaffeensis (≤68.3%), andmap1 of Cowdria ruminantium (67.3%). The peptide sequence of the E. ewingii partial gene product was deduced (168 amino acids) and the antigenicity profile was analyzed, revealing a hydrophilic protein with ≤69.1% identity to P28 of E. chaffeensis, ≤67.3% identity to P30 of E. canis, and ≤63.1% identity to MAP1 of C. ruminantium. Primers were selected from the E. ewingii p28 sequence and used to develop a species-specific PCR diagnostic assay. The p28 PCR assay amplified the expected 215-bp product from DNA that was extracted from EDTA-treated blood from each of the confirmed E. ewingii infections that were available. The assay did not produce PCR products with DNA extracted from E. chaffeensis-, E. canis-, or E. phagocytophila-infected samples, confirming the specificity of the p28 assay forE. ewingii. The sensitivity of the E. ewingii-specific PCR assay was evaluated and determined to detect as few as 38 copies of the p28 gene.
机译:PCR被用于扩增一个 Ehrlichia ewingii 基因的537 bp区域,该基因编码查夫埃里希氏菌28-kDa主要抗原蛋白(P28)的同源物。 E。从确诊为感染病例的四名人类和一只犬的全血中提取的DNA扩增出ewingii p28 基因的同源物。 PCR产物的测序(505 bp)显示了一个部分基因,该基因与来自埃希氏菌 Cowdria spp。: p30 的外膜蛋白基因同源。 Ehrlichia canis (≤71.3%), E的 p28 。 chaffeensis (≤68.3%)和 Cowdria ruminantium map1 (67.3%)。 E的肽序列。推导了尤文氏菌的部分基因产物(168个氨基酸),并分析了其抗原性,显示出与 E的P28具有≤69.1%同一性的亲水蛋白。 chaffeensis ,与 E的P30的同一性≤67.3%。 canis ,并且与 C的MAP1的一致性≤63.1%。反刍动物。引物选自 E。 ewingii p28 序列,用于开发物种特异性PCR诊断测定。 p28 PCR分析从每个确认的 E的EDTA处理血液中提取的DNA扩增了预期的215-bp产物。现有的ewingii 感染。该测定法未产生提取自 E的DNA的PCR产物。 chaffeensis- E。 canis- E。噬菌体感染的标本,证实了 p28 分析对 E的特异性。 ewingii E的灵敏度。评价并鉴定了尤因氏特异的PCR检测法,可检测到38个拷贝的 p28 基因。

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