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首页> 外文期刊>Journal of Clinical Microbiology >Capsule Gene Analysis of Invasive Haemophilus influenzae: Accuracy of Serotyping and Prevalence of IS1016 among Nontypeable Isolates
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Capsule Gene Analysis of Invasive Haemophilus influenzae: Accuracy of Serotyping and Prevalence of IS1016 among Nontypeable Isolates

机译:侵袭性流感嗜血杆菌的胶囊基因分析:血清分型和IS1016的流行率在非分型分离株中。

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We evaluated the accuracy of serologic capsule typing by analyzing capsule genes and related markers among invasive Haemophilus influenzae isolates before and after the introduction of H. influenzae serotype b (Hib) conjugate vaccines. Three hundred and sixty invasive H. influenzae isolates were collected as part of Active Bacterial Core surveillance within the Georgia Emerging Infections Program between 1 January 1989 and 31 July 1998. All isolates were biotyped, serotyped by slide agglutination serotyping (SAST), and evaluated using PCR capsule typing. Nontypeable H. influenzae (NTHi) isolates were probed with Hib cap-gene-containing plasmid pUO38 and with IS1016; a subset was examined with phosphoglucose isomerase (pgi) genotyping and pulsed-field gel electrophoresis (PFGE). Discrepancies between SAST and PCR capsule typing were found for 64/360 (17.5%) of the isolates; 48 encapsulated by SAST were NTHi by PCR, 8 NTHi by SAST were encapsulated by PCR, 6 encapsulated by SAST were a different capsule type by PCR, and 2 encapsulated by SAST were capsule-deficient Hib variants (Hib-minus). None of the PCR-confirmed NTHi isolates demonstrated homology with residual capsule gene sequences; 19/201 (9.5%) had evidence of IS1016, an insertion element associated with division I H. influenzae capsule serotypes. The majority of IS1016-positive NTHi were biotypes I and V and showed some genetic relatedness by PFGE. In conclusion, PCR capsule typing was more accurate than SAST and Hib-minus variants were rare. IS1016 was present in 9.5% of NTHi isolates, suggesting that this subset may be more closely related to encapsulated organisms. A better understanding of NTHi may contribute to vaccine development.
机译:我们通过分析 H引入之前和之后的侵袭性流感嗜血杆菌分离株的胶囊基因和相关标志物,评估了血清学胶囊分型的准确性。乙型流感病毒(Hib)结合疫苗。三百六十个侵入性 H。在1989年1月1日至1998年7月31日期间,佐治亚州新兴感染计划中进行了主动细菌核心监测,收集了流感分离株。对所有分离株进行了生物分型,血清分型血清分型(SAST)进行血清分型,并采用PCR胶囊分型。不可输入的 H。分别用含Hib cap 基因的质粒pUO38和IS 1016 探测流感嗜血杆菌(NTHi)分离株。用磷酸葡萄糖异构酶( pgi )基因分型和脉冲场凝胶电泳(PFGE)检查了一个子集。发现64/360(17.5%)分离株的SAST与PCR胶囊类型之间存在差异。 SAST封装的48个是NTHi的PCR,SAST封装的8个NTHi是通过PCR封装的,SAST封装的6个是通过PCR不同的胶囊类型,SAST封装的2个是缺乏胶囊的Hib变异体(Hib-负)。经PCR确认的NTHi分离株均未显示与残留荚膜基因序列同源。 19/201(9.5%)的证据是IS 1016 ,这是与I H分区相关的插入元素。流感胶囊的血清型。 IS 1016 阳性NTHi的大多数为生物型I和V,并且通过PFGE表现出一定的遗传相关性。总之,PCR胶囊的分型比SAST更准确,Hib减号变体很少见。 IS 1016 存在于9.5%的NTHi分离物中,这表明该亚群可能与封装的生物体更紧密相关。对NTHi的更好理解可能有助于疫苗的开发。

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