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首页> 外文期刊>Journal of Clinical Microbiology >Phenotyping and Genotyping of Sporothrix schenckii Isolates According to Geographic Origin and Clinical Form of Sporotrichosis
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Phenotyping and Genotyping of Sporothrix schenckii Isolates According to Geographic Origin and Clinical Form of Sporotrichosis

机译:根据孢子菌病的地理起源和临床形式对Sporothrix schenckii分离株进行表型和基因分型

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Sporothrix schenckii isolates of fixed and lymphocutaneous clinical forms from Mexico (MX), Guatemala (GT), and Colombia (CO) as well as environmental isolates from MX were studied by analyzing their phenotypic characteristics (conidial length, thermotolerance by percent growth inhibition [GI] at 35 and 37°C, median lethal dose [LD50]) and genotypic characteristics (by random amplified polymorphic DNA [RAPD] analysis-PCR). A significant difference (P < 0.01) in the mean conidial length of S. schenckii clinical isolates from CO (x? = 4.03 ± 1.04 μm) compared with those of clinical isolates from MX (x? = 2.06 ± 0.53 μm) and GT (x? = 2.68 ± 0.83 μm) was observed. The lowest thermotolerance, as determined by measurement of percent GI, was exhibited by isolates from CO at 35°C (x? = 50.1% ± 15.9%) and 37°C (x? = 72.7% ± 10.9%). In general, the highest virulence, as determined by measurement of the LD50 for mice, was observed for the MX environmental isolates. RAPD analysis-PCR with 10-mer primers OPBG-01, OPBG-14, and OPBG-19 generated 52 reproducible bands. The 44 Sporothrix isolates fell into four major groups by hierarchical cluster analysis. The first group (group I), formed by 25 (of 27) isolates from MX, had two subgroups: subgroup Ia with 10 environmental isolates and subgroup Ib with 14 clinical isolates. The second group (group II) had two subgroups: subgroup IIa, formed by isolates from CO, and subgroup IIb, formed by isolates from GT. Groups III and IV each had only one clinical isolate from MX. A principal-component analysis of the same data yielded three distinct groups, depending on the geographical origins of the isolates, including the isolates in groups III and IV from MX, which were grouped with the isolates from MX by principal-component analysis. This study revealed that isolates from CO had low thermotolerances at 35 and 37°C and could be associated with superficial skin lesions in patients with fixed clinical forms of sporotrichosis, the most frequent form of the disease in CO. Distinct patterns dependent on geographical origins were also revealed by RAPD analysis-PCR, but these had no relation to the clinical form of the disease.
机译:通过分析其表型特征(分生孢子长,通过在35和37°C下的生长抑制百分数[GI],中值致死剂量[LD 50 ])和基因型特征(通过随机扩增多态性DNA [RAPD]分析-PCR)确定耐热性。 S的平均分生孢子长度有显着差异( P <0.01)。与MX的临床分离株( x? = 2.06±0.53μm)和schenckii的CO分离株( x? = 4.03±1.04μm)和观察到GT( = 2.68±0.83μm)。通过测量GI百分比确定的最低耐热性是在35°C( x? = 50.1%±15.9%)和37°C( x?< / em> = 72.7%±10.9%)。通常,对于MX环境分离株,观察到的最高毒力是通过测量小鼠的LD 50 来确定的。使用10-mer引物OPBG-01,OPBG-14和OPBG-19进行RAPD分析-PCR产生52条可重复条带。通过分层聚类分析,将44个 Sporothrix 分离株分为四个主要类别。由MX中的25个(共27个)分离株组成的第一组(I组)有两个亚组:Ia亚组10个环境分离株和Ib亚组14个临床分离株。第二组(第二组)具有两个亚组:由来自CO的分离物形成的IIa组和由GT的分离物形成的IIb组。第三组和第四组每个仅具有一种来自MX的临床分离株。根据分离物的地理来源,对相同数据进行主成分分析可得出三个不同的组,包括来自MX的III和IV组中的分离物,这些分离物通过主成分分析与来自MX的分离物分组在一起。这项研究表明,从分离出的CO中分离出的CO在35和37°C时具有较低的耐热性,并且可能与具有固定临床形式的孢子虫病(CO中最常见的疾病)的患者的浅表皮肤病变有关。 RAPD分析-PCR也揭示了这种情况,但这些与疾病的临床形式无关。

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