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Detection of a Human Rotavirus with G12 and P[9] Specificity in Thailand

机译:在泰国检测具有G12和P [9]特异性的人类轮状病毒

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G12 rotavirus has not been detected anywhere in the world since the first detection of a human strain, L26 (G12, P1B[4]), in the Philippines in 1990. In this study, we isolated a human rotavirus (strain T152) with a VP7 of G12 specificity from the stool of an 11-month-old diarrheic patient in Thailand. The strain T152 exhibited a long RNA pattern and subgroup I specificity. In the comparison of the nucleotide and amino acid sequences of the VP7 gene of strain T152 with those of rotaviruses with different G type specificities, strain T152 showed the highest identity, 90.9 and 93.9%, respectively, to G12 prototype strain L26. In contrast, the VP4 gene of strain T152 showed the highest identity with P[9] specificity of human strains K8 and AU-1 and feline strains Cat2 and FRV-1, with homologies of 89.3 to 90.6% at the nucleotide level and 93.9 to 95.6% at the amino acid level. Thus, strain T152 was found to be a natural reassortant strain with G12 and P[9] specificities.
机译:自1990年在菲律宾首次检测到人类L26株(G12,P1B [4])以来,在世界任何地方都未检测到G12轮状病毒。来自泰国一名11个月大腹泻患者粪便的G12特异性VP7。 T152菌株表现出长RNA模式和I亚组特异性。在比较菌株T152的VP7基因的核苷酸和氨基酸序列与具有不同G型特异性的轮状病毒的核苷酸和氨基酸序列时,菌株T152显示出与G12原型菌株L26的最高同一性,分别为90.9%和93.9%。相比之下,菌株T152的VP4基因与人类菌株K8和AU-1以及猫类Cat2和FRV-1的P [9]特异性具有最高的同一性,在核苷酸水平上的同源性为89.3%至90.6%,而在核苷酸水平上的同源性为93.9%。氨基酸水平为95.6%。因此,发现菌株T152是具有G12和P [9]特异性的天然重配菌株。

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