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Parallel multilevel solvers for the cardiac electro-mechanical coupling

机译:心脏机电耦合的并行多级求解器

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摘要

We develop a parallel solver for the cardiac electro-mechanical coupling. The electric model consists of two non-linear parabolic partial differential equations (PDEs), the so-called Bidomain model, which describes the spread of the electric impulse in the heart muscle. The two PDEs are coupled with a non-linear elastic model, where the myocardium is considered as a nearly-incompressible transversely isotropic hyperelastic material. The discretization of the whole electro-mechanical model is performed by Q1 finite elements in space and a semi-implicit finite difference scheme in time. This approximation strategy yields at each time step the solution of a large scale ill-conditioned linear system deriving from the discretization of the Bidomain model and a non-linear system deriving from the discretization of the finite elasticity model. The parallel solver developed consists of solving the linear system with the Conjugate Gradient method, preconditioned by a Multilevel Schwarz preconditioner, and the non-linear system with a Newton-Krylov-Algebraic Multigrid solver. Three-dimensional parallel numerical tests on a Linux cluster show that the parallel solver proposed is scalable and robust with respect to the domain deformations induced by the cardiac contraction.
机译:我们开发了用于心脏机电耦合的并行求解器。电模型由两个非线性抛物线偏微分方程(PDE)组成,即所谓的双域模型,该模型描述了电脉冲在心肌中的传播。这两个PDE与非线性弹性模型耦合,其中心肌被视为几乎不可压缩的横向各向同性超弹性材料。整个机电模型的离散化是由空间中的Q1个有限元和一个时间上的半隐式有限差分方案完成的。这种近似策略在每个时间步上都得出了由双向域模型的离散化产生的大规模病态线性系统和从有限弹性模型的离散化得到的非线性系统的解。开发的并行求解器包括用共轭梯度法求解线性系统,该方法由多级Schwarz预处理器进行预处理,而非线性系统则采用Newton-Krylov-代数多重网格求解器。在Linux群集上进行的三维并行数值测试表明,所提出的并行求解器对于由心脏收缩引起的域变形具有可扩展性和鲁棒性。

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