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ADRB1 was identified as a potential biomarker for breast cancer by the co-analysis of tumor mutational burden and immune infiltration

机译:通过肿瘤突变负担和免疫浸润的共同分析将ADRB1鉴定为乳腺癌的潜在生物标志物

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摘要

Breast cancer (BRCA) has traditionally been considered as having poor immunogenicity and is characterized by relatively low tumor mutational burden (TMB). Improving immunogenicity may improve the response to clinical immunotherapy of BRCA. However, the relationship between TMB, immune infiltration, and prognosis in BRCA remains unclear. We aimed to explore their interrelations and potential biomarkers. In this study, based on somatic mutation data of BRCA from The Cancer Genome Atlas (TCGA), patients were categorized into high and low TMB groups utilizing the TMB values. CIBERSOFT algorithm indicated significant infiltration of activated partial immune cells in high TMB group. Besides, ADRB1 had been identified as a prognosis-related immune gene in the mutant genes by the combination of the ImmPort database and the univariate Cox analysis. ADRB1 mutation was associated with lower TMB and manifested a satisfactory clinical prognosis. Various database applications (Gene Set Enrichment Analysis, Tumor IMmune Estimation Resource, Connectivity Map, KnockTF) supported the selection of treatment strategies targeting ADRB1. In conclusion, TMB was not an independent prognostic factor for BRCA and high TMB was more likely to activate a partial immune response. ADRB1 was identified as a potential biomarker and may provide new insights for co-therapy of BRCA.
机译:乳腺癌(BRCA)传统上被认为是具有差的免疫原性,其特征在于肿瘤突变负荷(TMB)。改善免疫原性可以改善对BRCA的临床免疫治疗的反应。然而,在BRCA中TMB,免疫浸润和预后之间的关系仍不清楚。我们的目标是探索他们的相互关系和潜在的生物标志物。在本研究中,基于BRCA的细胞突变数据来自癌症基因组地图集(​​TCGA),利用TMB值分类为高和低TMB组。 Cibersoft算法表明高TMB组中活化部分免疫细胞的显着渗透。此外,ADRB1已被Immport数据库和单变量COX分析的组合鉴定为突变基因中的预后相关免疫基因。 ADRB1突变与较低的TMB相关,表现出令人满意的临床预后。各种数据库应用(基因设定浓缩分析,肿瘤免疫估计资源,连接地图,KnockTF)支持靶向ADRB1的治疗策略选择。总之,TMB不是BRCA的独立预后因素,高TMB更可能激活部分免疫应答。 ADRB1被确定为潜在的生物标志物,可以为BRCA的共同治疗提供新的见解。

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