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Numerically Dominant Denitrifying Bacteria from World Soils

机译:来自世界土壤的数字优势反硝化细菌

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摘要

Nineteen soils, three freshwater lake sediments, and oxidized poultry manure were examined to determine the dominant denitrifier populations. The samples, most shown or expected to support active denitrification, were from eight countries and included rice paddy, temperate agricultural, rain forest, organic, and waste-treated soils. Over 1,500 organisms that could grow anaerobically on nitrate agar were isolated. After purification, 146 denitrifiers were obtained, as verified by production of N2 from NO3-. These isolates were characterized by 52 properties appropriate for the Pseudomonas-Alcaligenes group. Numerical taxonomic procedures were used to group the isolates and compare them with nine known denitrifier species. The major group isolated was representative of Pseudonomas fluorescens biotype II. The second most prevalent group was representative of Alcaligenes. Other Pseudomonas species as well as members of the genus Flavobacterium, the latter previously not known to denitrify, also were identified. One-third of the isolates could not utilize glucose or other carbohydrates as sole carbon sources. Significantly, none of the numerically dominant denitrifiers we isolated resembled the most studied species: Pseudomonas denitrificans, Pseudomonas perfectomarinus, and Paracoccus denitrificans. Denitrification appears to be a property of a very diverse group of gram-negative, motile bacteria, as shown by the large number (22.6%) of ungrouped organisms. The diversity of denitrifiers from a given sample was usually high, with at least two groups present. Denitrifiers, nitrite accumulators, and organisms capable of anaerobic growth were present in the ratio of 0.20±0.23:0.81±0.23:1. There were few correlations between their numbers and the sample characteristics measured. However, the temperatures at which isolates could grow were significantly related to the temperatures of the environments from which they were isolated. Regression analysis revealed few relationships between physical parameters and bacterial types, save for the anaerobe numbers, in which 94% of the variance could be accounted for.
机译:检查了19种土壤,3种淡水湖泊沉积物和氧化的家禽粪便,以确定主要的反硝化菌种群。显示或预期可支持主动反硝化的样品来自八个国家,包括稻田,温带农业,雨林,有机土壤和废物处理过的土壤。分离了1,500多种可以在硝酸琼脂上厌氧生长的生物。纯化后,获得了146个反硝化剂,通过从NO3 -生成N2进行验证。这些分离物的特征是适合假单胞菌-产碱菌的52种特性。使用数字分类程序对分离物进行分组,并将其与9种已知的反硝化菌种进行比较。分离出的主要群体是荧光假单胞菌生物型II的代表。第二个最普遍的群体是产碱菌。还鉴定了其他假单胞菌属物种和黄杆菌属成员,后者以前不知道反硝化作用。三分之一的分离物不能利用葡萄糖或其他碳水化合物作为唯一的碳源。值得注意的是,我们分离出的在数字上占主导地位的反硝化剂都不像研究最多的物种:反硝化假单胞菌,完美假单胞菌和反硝化副球菌。如大量(22.6%)的未分组生物所示,反硝化似乎是革兰氏阴性运动菌的一种非常多样化的特性。给定样品中反硝化剂的多样性通常很高,至少存在两组。反硝化剂,亚硝酸盐累积剂和能够厌氧生长的生物的比例为0.20±0.23:0.81±0.23:1。它们的数量与所测样品特性之间几乎没有相关性。但是,分离株可以生长的温度与分离株所处环境的温度显着相关。回归分析表明,除了厌氧菌数量外,物理参数与细菌类型之间的关系很少,其中94%的变异可以解释。

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