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Macroscopic models for networks of coupled biological oscillators

机译:耦合生物振荡器网络的宏观模型

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摘要

The study of synchronization of coupled biological oscillators is fundamental to many areas of biology including neuroscience, cardiac dynamics, and circadian rhythms. Mathematical models of these systems may involve hundreds of variables in thousands of individual cells resulting in an extremely high-dimensional description of the system. This often contrasts with the low-dimensional dynamics exhibited on the collective or macroscopic scale for these systems. We introduce a macroscopic reduction for networks of coupled oscillators motivated by an elegant structure we find in experimental measurements of circadian protein expression and several mathematical models for coupled biological oscillators. The observed structure in the collective amplitude of the oscillator population differs from the well-known Ott-Antonsen ansatz, but its emergence can be characterized through a simple argument depending only on general phase-locking behavior in coupled oscillator systems. We further demonstrate its emergence in networks of noisy heterogeneous oscillators with complex network connectivity. Applying this structure, we derive low-dimensional macroscopic models for oscillator population activity. This approach allows for the incorporation of cellular-level experimental data into the macroscopic model whose parameters and variables can then be directly associated with tissue- or organism-level properties, thereby elucidating the core properties driving the collective behavior of the system.
机译:对耦合生物振荡器的同步性研究是许多生物学领域(包括神经科学,心脏动力学和昼夜节律)的基础。这些系统的数学模型可能涉及成千上万个单个单元格中的数百个变量,从而导致对系统的高度描述。这通常与这些系统在集体或宏观尺度上表现出的低维动力学形成对比。我们引入了一个耦合振荡器网络的宏观简化,该网络由一个优雅的结构所激发,该结构在生物节律蛋白表达的实验测量和耦合生物振荡器的几个数学模型中找到。观察到的振荡器总体振幅的结构与众所周知的Ott-Antonsen ansatz不同,但是它的出现可以通过仅取决于耦合振荡器系统中一般锁相特性的简单论证来表征。我们进一步证明了它在具有复杂网络连接性的噪声异构振荡器网络中的出现。应用这种结构,我们可以得出振荡器种群活动的低维宏观模型。这种方法可以将细胞水平的实验数据整合到宏观模型中,该模型的参数和变量可以直接与组织或生物体的特性相关联,从而阐明驱动系统集体行为的核心特性。

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