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Update soybean Zhonghuang 13 genome to a golden reference

         

摘要

Dear Editor,Soybean is one of the most important crops worldwide.A high-quality reference genome will facilitate its functional analysis and molecular breeding (Wang and Tian,2015).Previously,we de novo assembled a high-quality Chinese soybean genome Gmax_ZH13 (Shen et al.,2018,Yang and Huang,2018).However,due to technical limitations at the time when we generated Gmax_ZH13,a large number of small contigs were not anchored onto chromosomes.Therefore,we here build a new golden reference genome for Zhonghuang 13 consisting of 20 nearly complete chromosomes by adding more single-molecule real time (SMRT) sequencing reads.Furthermore,we add large RNA-seq and smRNA-seq datasets for improving the annotation of its protein coding genes.

著录项

  • 来源
    《中国科学》 |2019年第9期|1257-1260|共4页
  • 作者单位

    School of Pharmaceutical Sciences;

    Guangzhou University of Chinese Medicine;

    Guangzhou 510006;

    China;

    State Key Laboratory of Plant Cell and Chromosome Engineering;

    Institute of Genetics and Developmental Biology;

    Innovative Academy of Seed Design;

    Chinese Academy of Sciences;

    Beijing 100101;

    China;

    State Key Laboratory of Plant Genomics;

    Institute of Genetics and Developmental Biology;

    Innovative Academy of Seed Design;

    Chinese Academy of Sciences;

    Beijing 100101;

    China;

    University of Chinese Academy of Sciences;

    Beijing 100039;

    China;

  • 原文格式 PDF
  • 正文语种 chi
  • 中图分类 生物科学;
  • 关键词

    functional; analysis; at; the; time; real; time;

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