结肠弯曲菌Real-time PCR检测方法的建立

摘要

目的 建立结肠弯曲菌实时PCR检测方法并评价该方法的可行性.方法 BLAST与Vector NTI Suite 6.0筛选出结肠弯曲菌的特异基因ceuE作为检测靶基因,Primer 5.0和Oligo6.0设计引物和探针,优化实时 PCR反应体系并评价其最低检测限、特异性、可重复性.结果 与结论 在结肠弯曲菌的ceuE特异基因上设计引物和探针,经优化了的实时PCR反应体系最低检测限为5.62CFU,特异度为100%,变异系数为0.15%~1.30%,本研究为结肠弯曲菌的快速检测提供了一种参考方法.%The aim of this study is to develop the real-time PCR assays to detect and qualify C. coli from stool specimen. The primers and probe were designed based on the specific sequence of ceuE gene in C. coli using Primer 5.0 and Vector NTI Suite 6.0 e. The PCR assay was optimized with the reference C. coli strains. The standard curve based on the dilutions of genomic DNA showed a linear relationship between log CFU/mL and threshold cycles. The detectable limitation was 5.62 CFU/mL by using purified DNA from bacteria culture. The reproducibility of this assay was assessed by calculating the variation of the threshold cycle value and the slope from test repeats for the same strains and different strains. Our results indicate that the developed assay has high sensitivity and specificity for identification of C. coli.