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PET/CT Radiomic Sequencer for Prediction of EGFR and KRAS Mutation Status in NSCLC Patients

机译:PET / CT放射测序仪可预测NSCLC患者的EGFR和KRAS突变状态

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The aim of this study was to develop radiomic models using PET/CT radiomic features with different machine learning approaches for finding best predictive epidermal growth factor receptor (EGFR) and Kirsten rat sarcoma viral oncogene (KRAS) mutation status. Patient’s images including PET and CT [diagnostic (CTD) and low dose CT (CTA)] were pre-processed using wavelet (WAV), Laplacian of Gaussian (LOG) and 64 bin discretization (BIN) (alone or in combinations) and several features from images were extracted. The prediction performance of model was checked using the area under the receiver operator characteristic (ROC) curve (AUC). Results showed a wide range of radiomic model AUC performances up to 0.75 in prediction of EGFR and KRAS mutation status. Combination of K-Best and variance threshold feature selector with logistic regression (LREG) classifier in diagnostic CT scan led to the best performance in EGFR (CTD-BIN+B-KB+LREG, AUC: 0.75±0.10) and KRAS (CTD-BIN-LOG-WAV+B-VT+LREG, AUC: 0.75±0.07) respectively. Additionally, incorporating PET, kept AUC values at ~0.74. When considering conventional features only, highest predictive performance was achieved by PET SUVpeak (AUC: 0.69) for EGFR and by PET MTV (AUC: 0.55) for KRAS. In comparison with conventional PET parameters such as standard uptake value, radiomic models were found as more predictive. Our findings demonstrated that non-invasive and reliable radiomics analysis can be successfully used to predict EGFR and KRAS mutation status in NSCLC patients.
机译:这项研究的目的是使用具有不同机器学习方法的PET / CT放射学特征开发放射学模型,以找到最佳的预测表皮生长因子受体(EGFR)和Kirsten大鼠肉瘤病毒癌基因(KRAS)突变状态。使用小波(WAV),高斯拉普拉斯算子(LOG)和64 bin离散化(BIN)(单独或组合使用)和几种方法对包括PET和CT [诊断(CTD)和低剂量CT(CTA)]的患者图像进行预处理从图像中提取特征。使用接收器操作员特征(ROC)曲线(AUC)下的面积检查模型的预测性能。结果表明,在预测EGFR和KRAS突变状态时,放射学模型AUC的性能高达0.75。在诊断性CT扫描中将K-Best和方差阈值特征选择器与逻辑回归(LREG)分类器结合使用,可在EGFR(CTD-BIN + B-KB + LREG,AUC:0.75±0.10)和KRAS(CTD- BIN-LOG-WAV + B-VT + LREG,AUC:0.75±0.07)。此外,掺入PET可使AUC值保持在〜0.74。仅考虑常规功能时,针对EGFR的PET SUVpeak(AUC:0.69)和针对KRAS的PET MTV(AUC:0.55)实现了最高的预测性能。与常规PET参数(例如标准摄取值)相比,发现放射学模型更具预测性。我们的发现表明,无创且可靠的放射组学分析可成功用于预测NSCLC患者的EGFR和KRAS突变状态。

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